Package: tiledbsoma
Type: Package
Title: 'TileDB' Stack of Matrices, Annotated ('SOMA')
Description: Interface for working with 'TileDB'-based Stack of
        Matrices, Annotated ('SOMA'): an open data model for
        representing annotated matrices, like those commonly used for
        single cell data analysis. It is documented at
        <https://github.com/single-cell-data>; a formal specification
        available is at
        <https://github.com/single-cell-data/SOMA/blob/main/abstract_specification.md>.
Version: 2.3.0
Authors@R: c(
    person(given = "Paul", family = "Hoffman",
           role = c("cre", "aut"), email = "tiledb-r@tiledb.com",
           comment = c(ORCID = "0000-0002-7693-8957")),
    person(given = "Aaron", family = "Wolen",
           role = "aut", email = "aaron@tiledb.com",
           comment = c(ORCID = "0000-0003-2542-2202")),
    person(given = "Julia", family = "Dark",
           role = "ctb", email = "julia@tiledb.com"),
    person(given = "John", family = "Kerl",
           role = "ctb", email = "john.kerl@tiledb.com"),
    person(given = "TileDB, Inc.",
           role = c("cph", "fnd"))
    )
URL: https://single-cell-data.github.io/TileDB-SOMA/,
        https://github.com/single-cell-data/TileDB-SOMA
BugReports: https://github.com/single-cell-data/TileDB-SOMA/issues
License: MIT + file LICENSE
Encoding: UTF-8
Additional_repositories: https://tiledb-inc.r-universe.dev,
        https://bnprks.r-universe.dev/
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Depends: R (>= 4.1.0)
Imports: arrow (>= 19.0.1), bit64 (>= 4.6.0.1), data.table, fs, glue,
        lifecycle, Matrix (>= 1.6.4), methods, nanoarrow, R6, Rcpp,
        rlang (>= 1.1.5), stats, tiledb (>= 0.34.0), tools, utils
LinkingTo: nanoarrow, Rcpp, RcppInt64
Suggests: BPCells, datasets, iterators, itertools, jsonlite, knitr,
        pbmc3k, pbmc3k.tiledb, rmarkdown, S4Vectors, SeuratObject (>=
        4.1.0), SingleCellExperiment (>= 1.20.0), SummarizedExperiment
        (>= 1.28.0), testthat (>= 3.0.0), tibble, withr
Config/testthat/edition: 2
OS_type: unix
SystemRequirements: C++20, cmake, git
Config/pak/sysreqs: cmake git make libuv1-dev libzstd-dev libssl-dev
Repository: https://tiledb-inc.r-universe.dev
Date/Publication: 2026-01-27 15:20:09 UTC
RemoteUrl: https://github.com/single-cell-data/TileDB-SOMA
RemoteRef: 2.3.0
RemoteSha: aac88138d12a5fb87ed2601500fdab103ba8a8a0
RemoteSubdir: apis/r
NeedsCompilation: yes
Packaged: 2026-05-27 06:24:03 UTC; root
Author: Paul Hoffman [cre, aut] (ORCID:
    <https://orcid.org/0000-0002-7693-8957>),
  Aaron Wolen [aut] (ORCID: <https://orcid.org/0000-0003-2542-2202>),
  Julia Dark [ctb],
  John Kerl [ctb],
  TileDB, Inc. [cph, fnd]
Maintainer: Paul Hoffman <tiledb-r@tiledb.com>