tiledb - Modern Database Engine for Complex Data Based on Multi-Dimensional Arrays

The modern database 'TileDB' introduces a powerful on-disk format for storing and accessing any complex data based on multi-dimensional arrays. It supports dense and sparse arrays, dataframes and key-values stores, cloud storage ('S3', 'GCS', 'Azure'), chunked arrays, multiple compression, encryption and checksum filters, uses a fully multi-threaded implementation, supports parallel I/O, data versioning ('time travel'), metadata and groups. It is implemented as an embeddable cross-platform C++ library with APIs from several languages, and integrations. This package provides the R support.

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arrayhdfss3storage-managertiledbtiledb-apicpp

11.40 score 108 stars 4 dependents 332 scripts 683 downloads

tiledbsoma - 'TileDB' Stack of Matrices, Annotated ('SOMA')

Interface for working with 'TileDB'-based Stack of Matrices, Annotated ('SOMA'): an open data model for representing annotated matrices, like those commonly used for single cell data analysis. It is documented at <https://github.com/single-cell-data>; a formal specification available is at <https://github.com/single-cell-data/SOMA/blob/main/abstract_specification.md>.

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single-cellsingle-cell-genomicstiledbtiledb-apitiledb-somacpp

9.66 score 126 stars 1 dependents 58 scripts

tiledbcloud - TileDB Cloud Platform R Client Package

The TileDB Cloud Platform API Client Package offers access to the TileDB Cloud service.

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5.35 score 1 stars 93 scripts

pbmc3k - Raw and Processed Matrices of the PBMC 3k Dataset

What the package does (one paragraph).

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1.00 score

pbmc3k.tiledb - TileDB SOMA 'pbmc3k' Data Set

TileDB Array data from the 'pbmc3k' 3k PBMCs data set released by '10x Genomics' and converted into a 'TileDB'-based 'Stack of Matrices, Annotated ("SOMA")' format by the 'tiledbsoma' package.

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1.00 score